Metadata for cell type-specific epigenomic bigWig files hosted on UCSC Genome Browser. bigWig files contain the genomic ranges from each epigenomic assay, as well as a Score column which describes the peaks of the aggregate reads.
data("NOTT2019_bigwig_metadata")An object of class data.table (inherits from data.frame) with 18 rows and 14 columns.
https://doi.org/10.1126/science.aay0793
NOTT2019_bigwig_metadata <- data.table::data.table(
readxl::read_excel(
file.path(
"~/Desktop/Fine_Mapping/echolocatoR/annotations",
"NOTT2019/NOTT2019_snEpigenomics.xlsx"
)
)
)
usethis::use_data(NOTT2019_bigwig_metadata, overwrite = TRUE)
Other NOTT2019:
NOTT2019_epigenomic_histograms(),
NOTT2019_get_epigenomic_peaks(),
NOTT2019_get_interactions(),
NOTT2019_get_interactome(),
NOTT2019_get_promoter_celltypes(),
NOTT2019_get_promoter_interactome_data(),
NOTT2019_get_regulatory_regions(),
NOTT2019_plac_seq_plot(),
NOTT2019_superenhancers(),
get_NOTT2019_interactome(),
get_NOTT2019_superenhancer_interactome()