Example colocalization results

Source: R/data.R

Example colocalization results from running catalogueR::run_coloc on GWAS summary stats from all loci in Nalls23andMe_2019.

coloc_QTLs

Format

An object of class data.table (inherits from data.frame) with 259495 rows and 25 columns.

See also

Other coloc: COLOC.report_summary(), coloc_QTLs_full, gather_colocalized_data(), get_colocs(), plot_coloc_summary(), retrieve_sumstats_info(), run_coloc()

Examples

if (FALSE) { 
gwas.qtl_paths <- example_eQTL_Catalogue_query_paths() 
coloc_QTLs <- run_coloc(gwas.qtl_paths=gwas.qtl_paths, nThread=4, top_snp_only=T, save_path="~/Desktop/coloc_results.tsv.gz")
usethis::use_data(coloc_QTLs, overwrite=T)
}