Package index • echoplot

Locus Plotting

Main functions for creating multi-track locus plots.

plot_locus(): Generate a locus plot
plot_locus_multi(): Plot multi-GWAS/QTL or multi-ancestry fine-mapping results

Individual Tracks

Functions for generating individual plot tracks.

snp_track_merged(): SNP track merged
transcript_model_track(): Plot transcripts
ROADMAP_plot(): Plot annotation peaks: ROADMAP
XGR_plot(): Plot annotation peaks: XGR
XGR_plot_peaks(): Plot XGR peaks
dot_summary_plot(): Dot summary plot

Utilities

Helper and configuration functions.

get_palettes(): Get palettes
get_tx_biotypes(): Get transcript biotypes
list_namespace(): List namespace