Test for enrichment of HaploR annotations — haplor_epigenetics_enrichment • echoannot

Test for enrichment of HaploR annotations

haplor_epigenetics_enrichment(
  snp_list1,
  snp_list2,
  chisq = TRUE,
  fisher = TRUE,
  epigenetic_variables = c("Promoter_histone_marks", "Enhancer_histone_marks"),
  tissue_list = c("BRN", "BLD")
)

Source

See also

Other annotate: annotate_missense(), biomart_snp_info(), biomart_snps_to_geneInfo(), haplor_epigenetics_summary(), haplor_haploreg(), haplor_regulomedb(), plot_missense(), snps_by_mutation_type()