Each row represents an individual peak identified in the single-cell ATAC-seq data.

get_CORCES2020_scATACseq_peaks()

Details

Data originally from Corces et al. (bioRxiv), as of May 2020. Specifically: STable5_Features_scATAC-seq_Peaks_all

Examples

if (FALSE) {
dat <- readxl::read_excel(
    file.path(
        "~/Desktop/Fine_Mapping/echolocatoR/annotations",
        "Coceres_2020/STable5_Features_scATAC-seq_Peaks_all.xlsx"
    ),
    skip = 18
)
CORCES2020_scATACseq_peaks <- data.table::data.table(dat)

#### piggyback ####
tmp <- file.path(tempdir(), "CORCES2020_scATACseq_peaks.tsv.gz")
data.table::fwrite(CORCES2020_scATACseq_peaks, tmp, sep = "\t")
piggyback::pb_upload(
    file = tmp,
    repo = "RajLabMSSM/echoannot"
)
}