Summary stats of the top SNP(s) per locus. Used to query locus subsets.for fine-mapping.
data("topSNPs_Nalls2019")An object of class data.table (inherits from data.frame) with 97 rows and 7 columns.
topSS <- echodata::topSNPs_Nalls2019_raw
topSNPs_Nalls2019 <- echodata::import_topSNPs(topSS=topSS,
CHR="CHR",
POS="BP",
SNP="SNP",
P="P, all studies",
Effect="Beta, all studies",
Gene="Nearest Gene",
Locus="Nearest Gene",
remove_variants="rs34637584")
usethis::use_data(topSNPs_Nalls2019, overwrite=TRUE)
Formerly topSNPs.