Get Credible Set SNP counts

Source: R/get_CS_counts.R

Tally tool-specific and Union Credible Set sizes across fine-mapping methods and across loci.

get_CS_counts(merged_DT, top_CS_only = FALSE)

Arguments

merged_DT

Merged data.table of fine-mapped summary statistics.

top_CS_only

If a given method contains multiple Credible Sets, only choose one.

See also

Other summarise: get_CS_bins(), get_SNPgroup_counts(), results_report()

Examples

merged_DT <- echodata::get_Nalls2019_merged()
locus_order <- get_CS_counts(merged_DT = merged_DT)