Extract loci from GWAS/QTL summary statistics
Arguments
- topSNPs
Positions of the top SNPs prepare using import_topSNPs.
- fullSS
data.table of the full GWAS/QTL summary statistics.
- bp_distance
The basepair distance upstream/downstream of the proxy SNP (in
topSNPs) to extract.- munged
Whether
fullSSwas previously munged with format_sumstats.