Example XGR query results from XGR via XGR_query using the "ENCODE_DNaseI_ClusteredV3_CellTypes" dataset.
data("xgr_example")An object of class GRanges of length 8490.
xgr_example <- echoannot::XGR_query(
c("ENCODE_DNaseI_ClusteredV3_CellTypes"),
dat = echodata::BST1)
usethis::use_data(xgr_example, overwrite = TRUE)
Other XGR:
XGR_enrichment_bootstrap(),
XGR_enrichment_plot(),
XGR_enrichment(),
XGR_filter_assays(),
XGR_filter_sources(),
XGR_import_annotations(),
XGR_iterate_enrichment(),
XGR_iterate_overlap(),
XGR_merge_and_process(),
XGR_parse_metadata(),
XGR_plot_enrichment(),
XGR_prepare_foreground_background(),
XGR_query(),
XGR_sep_handler()