Converting LD matrices to sparse format reduces file size by half.
saveSparse(LD_matrix, LD_path, verbose = T)
Other LD:
LD_1KG_download_vcf()
,
LD_1KG()
,
LD_custom()
,
LD_ukbiobank()
,
compute_LD()
,
filter_LD()
,
get_locus_vcf_folder()
,
ldlinkr_ldproxy_batch()
,
load_or_create()
,
plot_LD()
,
popDat_1KGphase1
,
popDat_1KGphase3
,
rds_to_npz()
,
save_LD_matrix()
,
snpstats_get_MAF()
,
translate_population()