STMN2-splicing

Truncated stathmin-2 is a marker of TDP-43 pathology in frontotemporal dementia

now published in the Journal of Clinical Investigation

Investigating STMN2 cryptic splicing across the NYGC ALS consortium RNA-seq dataset (Data Freeze Februrary 2020)

Jack Humphrey, Towfique Raj lab

Contents

• STMN2-pipeline: a snakemake pipeline for extracting high quality junction reads and clustering them together

• Code to generate all plots in manuscript